Well, it was more like, unscrew and beat the crap out of the old, then install the new. The old scupper has 4 screws underneath in addition to the big nut from inside. The sealant would not give in easily so it took some force to finally dislodge the old intake. Plus, part of the gel coat stuck to the sealant and chipped off. I scrapped off all the old sealant with a sharp razor blade then installed the new one with a generous amount of 3M 5200 marine sealant.
Good question about the pumps starving for water. Next time I go out, I will disconnect the fill hoses at the sacs and turn all the hoses on and see if any of them are not producing full output. My guess is that yes, the output from the pumps with all three running will be less than with just one running. But even so, my fill time with all three pumps running reduced from about 15 minutes to about 9-1/2 minutes.